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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs34870118 chr5:176585939 G/GTA LOC388955 chr2:63849182-63850159:- -0.81 -11.82 2.34E-20 Box Plot
THYM rs35003209 chr5:176672974 TA/T LOC388955 chr2:63849182-63850159:- 0.84 12.14 4.99E-21 Box Plot
THYM rs351860 chr5:176542832 C/T LOC388955 chr2:63849182-63850159:- -0.59 -8.13 1.6E-12 Box Plot
THYM rs351862 chr5:176541370 C/T LOC388955 chr2:63849182-63850159:- -0.82 -12.6 5.56E-22 Box Plot
THYM rs351864 chr5:176539286 C/G LOC388955 chr2:63849182-63850159:- -0.88 -13.39 1.35E-23 Box Plot
THYM rs35283484 chr5:176585606 C/T LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs35535623 chr5:176629296 A/G LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs35571990 chr5:176601621 G/A LOC388955 chr2:63849182-63850159:- -0.84 -12.03 8.59E-21 Box Plot
THYM rs35806480 chr5:176634152 G/A LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs36006583 chr2:139028923 G/A SH3D19 chr4:152023903-152246784:- -0.49 -7.1 2.25E-10 Box Plot
THYM rs372432390 chr17:44857126 CT/C LOC644172 chr17:43677491-43679748:- -1.07 -10.53 1.24E-17 Box Plot
THYM rs372432390 chr17:44857126 CT/C LRRC37A4 chr17:43578685-43595516:- 0.57 8.65 1.26E-13 Box Plot
THYM rs3733873 chr5:176561113 T/C LOC388955 chr2:63849182-63850159:- -0.66 -9.34 4.28E-15 Box Plot
THYM rs3733875 chr5:176637240 G/T LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs373975887 chr16:30054934 GGCACAA/G ZNF254 chr19:24216207-24312763:+ 0.66 7.11 2.12E-10 Box Plot